Eukaryotic Genomic Databases

TRAMA

This volume explores databases containing genome-based data and genome-wide analyses. This book covers databases from all eukaryotic taxa, except plants. The chapters describe database contents and classic use-cases, which assist in accessing eukaryotic genomic data and encouraging comparative genomic research. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, step-by-step, readily reproducible computational protocols, and tips on troubleshooting and avoiding known pitfalls.Cutting-edge and authoritative, Eukaryotic Genomic Databases: Methods and Protocols is a valuable resource for geneticists and molecular biologists who are interested in the latest eukaryotic genomics data.The chapters 'PomBase: The Scientific Resource for Fission Yeast' and 'The Ensembl Genome Browser: Strategies for Accessing Eukaryotic Genome Data' are available open access under a CC BY 4.0 license via link.springer.com.

SOMMARIO

Identifying Sequenced Eukaryotic Genomes and Transcriptomes with diArk.- An Introduction to the Saccharomyces Genome Database (SGD).- Using the Candida Genome Database.- PomBase: The Scientific Resource for Fission Yeast.- EuPathDB: The Eukaryotic Pathogen Genomics Database Resource.- The Ensembl Genome Browser: Strategies for Accessing Eukaryotic Genome Data.- Mouse Genome Informatics (MGI) is the International Resource for Information on the Laboratory Mouse.- A Primer for the Rat Genome Database (RGD).- Bovine Genome Database: Tools for Mining the Bos taurus Genome.- Navigating Xenbase: An Integrated Xenopus Genomics and Gene Expression Database.- Using ZFIN: Data Types, Organization and Retrieval.- EchinoBase: Tools for Echinoderm Genome Analyses.- A Multi-Omics Database for Parasitic Nematodes and Trematodes.- Using WormBase: A Genome Biology Resource for Caenorhabditis elegans and Related Nematodes.- UsingWormBase ParaSite: An Integrated Platform for Exploring Helminth Genomic Data.- Using FlyBase to Find Functionally Related Drosophila Genes.- Hymenoptera Genome Database: Using HymenopteraMine to Enhance Genomic Studies of Hymenopteran Insects.- Navigating the i5k Workspace@NAL:  A Resource for Arthropod Genomes.

ALTRE INFORMAZIONI

• Condizione: Nuovo
• ISBN: 9781493992706
• Collana: Methods in Molecular Biology
• Dimensioni: 254 x 178 mm
• Formato: Brossura
• Illustration Notes: XVI, 581 p. 259 illus., 257 illus. in color.
• Pagine Arabe: 581
• Pagine Romane: xvi